RT journal article T1 Infection Strategies Deployed by Botrytis cinerea, Fusarium acuminatum, and Rhizopus stolonifer as a Function of Tomato Fruit Ripening Stage A1 Petrasch, Stefan A1 Silva, Christian J. A1 Mesquida-Pesci, Saskia D. A1 Gallegos, Karina A1 van den Abeele, Casper A1 Papin, Victor A1 Fernández Acero, Francisco Javier A1 Knapp, Steven J. A1 Blanco-Ulate, Barbara A2 Bioquímica y Biología MolecularMicrobiología, Medicina Preventiva, Salud Pública K1 broad host range pathogens K1 necrotrophic fungi K1 fruit-pathogen interactions K1 rotting K1 necrotic response K1 cell wall degrading enzymes K1 redox K1 de novo transcriptomes AB Worldwide, 20–25% of all harvested fruit and vegetables are lost annually in the fieldand throughout the postharvest supply chain due to rotting by fungal pathogens.Most postharvest pathogens exhibit necrotrophic or saprotrophic lifestyles, resulting indecomposition of the host tissues and loss of marketable commodities. Necrotrophicfungi can readily infect ripe fruit leading to the rapid establishment of disease symptoms.However, these pathogens generally fail to infect unripe fruit or remain quiescent untilhost conditions stimulate a successful infection. Previous research on infections offruit has mainly been focused on the host’s genetic and physicochemical factors thatinhibit or promote disease. Here, we investigated if fruit pathogens can modify their owninfection strategies in response to the ripening stage of the host. To test this hypothesis,we profiled global gene expression of three fungal pathogens that display necrotrophicbehavior—Botrytis cinerea, Fusarium acuminatum, and Rhizopus stolonifer—duringinteractions with unripe and ripe tomato fruit. We assembled and functionally annotatedthe transcriptomes of F. acuminatum and R. stolonifer as no genomic resourceswere available. Then, we conducted differential gene expression analysis to compareeach pathogen during inoculations versus in vitro conditions. Through characterizingpatterns of overrepresented pathogenicity and virulence functions (e.g., phytotoxinproduction, cell wall degradation, and proteolysis) among the differentially expressedgenes, we were able to determine shared strategies among the three fungi duringinfections of compatible (ripe) and incompatible (unripe) fruit tissues. Though eachpathogen’s strategy differed in the details, interactions with unripe fruit were commonlycharacterized by an emphasis on the degradation of cell wall components, particularlypectin, while colonization of ripe fruit featured more heavily redox processes, proteolysis,metabolism of simple sugars, and chitin biosynthesis. Furthermore, we determined thatthe three fungi were unable to infect fruit from the non-ripening (nor) tomato mutant, confirming that to cause disease, these pathogens require the host tissues to undergospecific ripening processes. By enabling a better understanding of fungal necrotrophicinfection strategies, we move closer to generating accurate models of fruit diseases andthe development of early detection tools and effective management strategies. PB FRONTIERS MEDIA SA SN 1664-462X YR 2019 FD 2019-03 LK http://hdl.handle.net/10498/21329 UL http://hdl.handle.net/10498/21329 LA eng DS Repositorio Institucional de la Universidad de Cádiz RD 15-nov-2026