RT journal article T1 Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq A1 Zeisel, A. A1 Muñoz Manchado, Ana Belén A1 Codeluppi, S. A1 Lönnerberg, P. A1 Manno, Giorgio A1 Juréus, A. A1 Marques, S. A1 Munguba, H. A1 He, L. A1 Betsholtz, C. A1 Rolny, C. A1 Castelo-Branco, G. A1 Hjerling-Leffler, Jens A1 Linnarsson, S. A2 Anatomía PatológicaBiología Celular, Histología, Historia de la Ciencia, Medicina Legal y Forense y Toxicología AB The mammalian cerebral cortex supports cognitive functions such as sensorimotor integration, memory, and social behaviors. Normal brain function relies on a diverse set of differentiated cell types, including neurons, glia, and vasculature. Here, we have used large-scale single-cell RNA sequencing (RNA-seq) to classify cells in the mouse somatosensory cortex and hippocampal CA1 region. We found 47 molecularly distinct subclasses, comprising all known major cell types in the cortex. We identified numerous marker genes, which allowed alignment with known cell types, morphology, and location. We found a layer I interneuron expressing Pax6 and a distinct postmitotic oligodendrocyte subclass marked by Itpr2. Across the diversity of cortical cell types, transcription factors formed a complex, layered regulatory code, suggesting a mechanism for the maintenance of adult cell type identity. PB American Association for the Advancement of Science SN 1095-9203 YR 2015 FD 2015 LK http://hdl.handle.net/10498/33431 UL http://hdl.handle.net/10498/33431 LA eng DS Repositorio Institucional de la Universidad de Cádiz RD 13-nov-2026